Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891249.1_cds_XP_016445985.1_40890
CDS Infomation

[gene=LOC107771170] [db_xref=GeneID:107771170] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016445985.1] [location=join(67019..67933,70430..71050)] [gbkey=CDS]
Sequence

ATGGAGATTTATTCCTCTACTTTGAACTTCGTTACACTGCTCTTGTTCTTTCCCTTCCTA
TTTATTGTTGTATTTGACAAATGGAAAAAATCAAAACAGCAAAAGTTTCCTCCAGGTCCA
TGGAGACTCCCCCTTATTGGTAGTATCCATCACTTGATCAGAGGAAGACTTCCACATCAA
ACTCTTACAAAATTAGCAAAAAAGTATGGTCCAATCATGTATTTTAAACTTGGAGAAGTT
CCTACAATGGTCATATCATCACCTAGTATGAAAAAACAAATTTTAAGAACTCACGATCTT
GCCTTTGCTACTATGCCTGTATTCACAACCATAAACATCTCTTCTTACAATTGCAAAGAC
ATTGCCTTCGCACCATATGGTGACAATTGGAGGCGAATGCGTAAAATATGTGTCATGGAA
CTTCTAACTGTCAAGATGGTCAAGTCATTTAGCTCAATTCGAAAAGATGAACTCTCGCGT
CTGCTTTCATCAATTCGATCCGTGAATGGACGTTCTGCTGTCAACCTGACACAAATAGTG
CTTCGGTTTACGAACTCGGTGATTTGTAGATCAGCCTTTGGGAAAGCATGTAAAAATCAA
GACGAGTTGATAAAATTGTTGAGTGAAGTACTGGAATCAGTAGGAGGATTAGTTGATGTG
GGTGATTTTTTCCCTTCTTGGAAGTTATTAATTCACAAGATGAGTGGGGCGAAATCAAGA
TTCGTAAAGCTGCATAACAAGGCTGATGCAGCTCTGGAGGAAATAATCAATGAGCATATT
AAGAATAGAGCTGCTGGAAGCAAGGGAAATGGTGAGTTTGCAGGTGAAGATTTTGTTGAC
GTTCTCCTAAGAATTAAGGACAATGGCGAACTTCAATTTCCAATCACAAATGATCACATA
AAAGCAGTCATTTCTGACATATTCGCTGGTGGAACTGAAACTTCAGCTGCGACTATTATT
TGGGCATTATCAGAAATGATGAAGAACCCTAAAATTATGATCAAGGCACAAAGTGAAGTG
AGACAAGCCTTCAAAGGAAACACAAGTTTCGATGAAGAAGATCTTGATAAGTTATCATAC
CTTAATTTAGTGATTAAAGAAATATTCAGGCTACATCCTCCGGGTTCTTTGCTGTTTAGG
GAAAGTAGGGAACAAACATATATTGATGGATATACAATACCTCTTAAGACCAGAGTGTTG
ATTAATCTATGGGCACTTGGAAGAGATCCAGAAATTTGGCATGACCCTGAGAATTTTATT
CCAGAGAGATTTGAAAATTCTCATGTTGACTTTATGGGAAATCATTTTGAGCTTGTTCCA
TTTGGTGCGGGCAAAAGGATTTGTCCAGGAATACAATTTGGTTTAGCAACTATTAAATAT
CCTTTGGCGCAGTTACTCTACCATTTTAATTGGGTGCTTCCATTTGGAACTAGTCAAGAA
GATTTGGATATGACAGAGAAAAATGGATTAACTGCAGGGAAACAGAAAGATCTATACTTA
ATTGCCGTAGATCACAAGGACAATGAAATTTTTTGA

Peptide Sequence

PEP ID

XP_016445985.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEIYSSTLNFVTLLLFFPFLFIVVFDKWKKSKQQKFPPGPWRLPLIGSIHHLIRGRLPHQ
TLTKLAKKYGPIMYFKLGEVPTMVISSPSMKKQILRTHDLAFATMPVFTTINISSYNCKD
IAFAPYGDNWRRMRKICVMELLTVKMVKSFSSIRKDELSRLLSSIRSVNGRSAVNLTQIV
LRFTNSVICRSAFGKACKNQDELIKLLSEVLESVGGLVDVGDFFPSWKLLIHKMSGAKSR
FVKLHNKADAALEEIINEHIKNRAAGSKGNGEFAGEDFVDVLLRIKDNGELQFPITNDHI
KAVISDIFAGGTETSAATIIWALSEMMKNPKIMIKAQSEVRQAFKGNTSFDEEDLDKLSY
LNLVIKEIFRLHPPGSLLFRESREQTYIDGYTIPLKTRVLINLWALGRDPEIWHDPENFI
PERFENSHVDFMGNHFELVPFGAGKRICPGIQFGLATIKYPLAQLLYHFNWVLPFGTSQE
DLDMTEKNGLTAGKQKDLYLIAVDHKDNEIF

Transcript Sequence

Gene sequence data has not been registered.